31132 MPP_Dbr1_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31132 chr_1 MPP_Dbr1_N 2119288 2121285 + MPP_Dbr1_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7445692 Thaps31132.2, Thaps31132.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0158

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9288

262751

ERO1
0.9259

4027

hypothetical protein
0.9122

9569

hypothetical protein
0.9117

4338

hypothetical protein
0.9116

260914

MFS
0.9081

bd874

(bd874) NA
0.9066

3320

Abhydrolase_5
0.9054

263979

PKc_like superfamily
0.9001

37810

GMPK
0.8993

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain; Dbr1 is an RNA lariat... cl13995 482.486 1.03E-167 92 - 382 specific 163619
MPP_superfamily superfamily metallophosphatase superfamily, metallophosphatase domain; Metallophosphatases (MPPs), also known... - 482.486 1.03E-167 92 - 382 superfamily 265413
DBR1 superfamily Lariat debranching enzyme, C-terminal domain; This presumed domain is found at the C-terminus of... - 101.995 3.18E-25 363 - 534 superfamily 252945

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27234 PHATRDRAFT_27234 196939 220743 103015 Cre02.g146950.t1.1 AT4G31770.1 361188

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016787 GO:0004518 GO:0016788 GO:0042578 -

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0004518

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

GO:0016788

hydrolase activity, acting on ester bonds

Details: 
Catalysis of the hydrolysis of any ester bond.
GO Category: 
MF

GO:0042578

phosphoric ester hydrolase activity

Details: 
Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
GO Category: 
MF

Add comment

Log in to post comments