31796 (RL39) Ribosomal_L39
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
31796 chr_2 (RL39) Ribosomal_L39 1896441 1896686 + Ribosomal_L39
NCBI ID Ensembl Genomes exon ID
7452323 Thaps31796.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046
Normalized Mean Residue
Thaps_bicluster_0205
0.26
(RS29) Ribosomal_S14 superfamily
0.9642
(RS30) Ribosomal_S30
0.9439
(RL36) Ribosomal_L36e
0.9294
(RS21) Ribosomal_S21e
0.9255
S1_S28E
0.9218
(RL14) Ribosomal_L14e
0.9159
PTZ00255
0.9115
(RL32) Ribosomal_L32_L32e
0.9072
hypothetical protein
0.9054
hypothetical protein
0.8936
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L39 Ribosomal L39 protein; Ribosomal L39 protein. cl00952 61.1222 4.07E-14 39 - 81 specific 250163
Ribosomal_L39 superfamily Ribosomal L39 protein; Ribosomal L39 protein. - 61.1222 4.07E-14 39 - 81 superfamily 260717
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16125 PHATRDRAFT_16125 272493 295963 68698 Not available AT4G31985.1 289148
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
Log in to post comments