33203 AAT_I superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33203 chr_3 AAT_I superfamily 1377861 1379627 - AAT_I superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441931 Thaps33203.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0238

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9265

337

TEF1
0.9056

2332

PTZ00340
0.905

268443

SAICAR_synt_Sc
0.9021

23018

RNase_PH superfamily
0.8979

268859

(GGTB1) PLN03201
0.8979

10419

hypothetical protein
0.8948

38472

HA2
0.8893

267979

HCO3_cotransp superfamily
0.8871

268574

Tim17
0.8849

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 406.767 1.77E-137 234 - 582 superfamily 267298
Beta_elim_lyase Beta-eliminating lyase; Beta-eliminating lyase. - 325.334 8.93E-107 236 - 525 multi-dom 250447

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49372 PHATRDRAFT_49372 227125 66163 Not available Cre10.g423550.t1.1 AT3G04520.1 471070

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008732 GO:0016832 GO:0018802 -

GO:0008732

L-allo-threonine aldolase activity

Details: 
Catalysis of the reaction: L-allo-threonine = glycine + acetaldehyde.
GO Category: 
MF

GO:0016832

aldehyde-lyase activity

Details: 
Catalysis of the cleavage of a C-C bond in a molecule containing a hydroxyl group and a carbonyl group to form two smaller molecules, each being an aldehyde or a ketone.
GO Category: 
MF

GO:0018802

2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity

Details: 
Catalysis of the reaction: 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate = pyruvate + succinic semialdehyde.
GO Category: 
MF

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