34227 B56
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
34227 chr_5 B56 668711 670199 - B56
NCBI ID Ensembl Genomes exon ID
7451793 Thaps34227.1, Thaps34227.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401
hypothetical protein
0.9193
PLN02350
0.9083
hypothetical protein
0.882
RPE65 superfamily
0.8804
COG5647
0.8746
AAA
0.8743
hypothetical protein
0.8742
PKc_like superfamily
0.8737
HA
0.8665
DUF563
0.8662
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN00122 superfamily serine/threonine protein phosphatase 2A; Provisional - 153.332 5.44E-44 351 - 455 superfamily 215064
PLN00122 superfamily serine/threonine protein phosphatase 2A; Provisional - 153.332 5.44E-44 351 - 455 superfamily 215064
B56 Protein phosphatase 2A regulatory B subunit (B56 family); Protein phosphatase 2A (PP2A) is a major... - 493.716 1.56E-172 42 - 449 multi-dom 250738
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11741 PHATRDRAFT_11741 276993 299445 434541 Cre13.g567800.t1.2 AT3G26020.2 564434
KEGG description KEGG Pathway
mRNA surveillance pathway map03015
GO:0000159 GO:0007165 GO:0008601 GO:0047778 -

protein phosphatase type 2A complex

Details: 
A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.
GO Category: 
CC

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

protein phosphatase type 2A regulator activity

Details: 
Modulation of the activity of the enzyme protein phosphatase type 2A.
GO Category: 
MF

[citrate-(pro-3S)-lyase] thiolesterase activity

Details: 
Catalysis of the reaction: [citrate (pro-3S)-lyase](acetyl form) + H2O = [citrate (pro-3S)-lyase](thiol form) + acetate.
GO Category: 
MF
Log in to post comments