34824 FtsH_fam
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
34824 chr_6 FtsH_fam 1070919 1073159 - FtsH_fam
NCBI ID Ensembl Genomes exon ID
7442368 Thaps34824.3, Thaps34824.2, Thaps34824.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171
MAD
0.9322
CbiO
0.9205
hypothetical protein
0.9195
PRK05279
0.9185
hypothetical protein
0.9175
hypothetical protein
0.9062
0.906
GlcD
0.9054
hypothetical protein
0.9044
hypothetical protein
0.9041
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 104.535 6.67E-26 231 - 393 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 104.535 6.67E-26 231 - 393 superfamily 267297
Peptidase_M41 superfamily Peptidase family M41; Peptidase family M41. - 246.353 1.08E-76 477 - 671 superfamily 250619
FtsH_fam ATP-dependent metalloprotease FtsH; HflB(FtsH) is a pleiotropic protein required for correct cell... - 697.497 0 172 - 671 multi-dom 233327
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17504 PHATRDRAFT_17504 206298 68658 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004222 GO:0005524 GO:0006508 GO:0000166 GO:0017111 GO:0016020 GO:0030163 GO:0008270 GO:0016021 GO:0004249 GO:0008133 GO:0008319 GO:0030402 -

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO Category: 
BP

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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