35408 PRK05134
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35408 chr_7 PRK05134 292805 293935 + PRK05134

Synonyms

NCBI ID Ensembl Genomes exon ID
7446184 Thaps35408.2, Thaps35408.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0127
 0.38

Most Highly Correlated Transcripts

32053

PRK08661
0.9062

262977

NA
0.89

30701

PRK05279
0.8863

3202

hypothetical protein
0.8842

31287

AAA_12
0.8782

268192

Zip superfamily
0.8723

37934

GRX_PICOT_like
0.8721

270222

0.8718

7740

hypothetical protein
0.8677

22362

(KCS1) CHS_like
0.8671

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... cl17173 66.2994 1.04E-13 151 - 251 specific 100107
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 66.2994 1.04E-13 151 - 251 superfamily 266528
PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase;... - 255.849 1.14E-83 84 - 340 multi-dom 235350

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9984 PHATRDRAFT_9984 188498 150645 120892 Cre10.g423750.t1.2 AT2G30920.1 499065

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 GO:0008168 GO:0006744 GO:0008425 GO:0004395 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0008168

methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to an acceptor molecule.
GO Category: 
MF

GO:0006744

ubiquinone biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
GO Category: 
BP

GO:0008425

2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity

Details: 
Catalysis of the reaction: 2-polyprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.
GO Category: 
MF

GO:0004395

hexaprenyldihydroxybenzoate methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + 3-hexaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-hexaprenyl-4-hydroxy-5-methoxybenzoate.
GO Category: 
MF

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