35810 TER_DECR_SDR_a
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35810 chr_8 TER_DECR_SDR_a 779830 780974 + TER_DECR_SDR_a

Synonyms

NCBI ID Ensembl Genomes exon ID
7452836 Thaps35810.2, Thaps35810.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0123

Most Highly Correlated Transcripts

33348

IGPD superfamily
0.922

31113

Cyt_c_Oxidase_VIb
0.9134

30701

PRK05279
0.9099

23819

hypothetical protein
0.9091

37934

GRX_PICOT_like
0.9077

11848

hypothetical protein
0.9066

17747

rplO
0.9051

22673

NA
0.9046

5942

MinD
0.9044

1394

(ADH1) Zn_ADH6
0.9044

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TER_DECR_SDR_a Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR; TTER is a... cl09931 313.369 4.61E-106 50 - 308 specific 187627
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 313.369 4.61E-106 50 - 308 superfamily 263925
PRK07576 short chain dehydrogenase; Provisional - 243.324 1.70E-78 50 - 305 multi-dom 236056

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264768 PHATRDRAFT_11319 PHATRDRAFT_11319 212175 205001 Not available Cre17.g731850.t1.2 AT3G12800.1 286541

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0008152 GO:0016491 GO:0008670 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008670

2,4-dienoyl-CoA reductase (NADPH) activity

Details: 
Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+.
GO Category: 
MF

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