35871 2-Hacid_dh_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35871 chr_8 2-Hacid_dh_1 835320 836606 + 2-Hacid_dh_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7452847 Thaps35871.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0208
 0.25

Most Highly Correlated Transcripts

bd1342

(bd1342) psaL
0.9622

bd218

(bd218) Chloroa_b-bind superfamily
0.9611

bd1820

(bd1820) Fasciclin
0.9598

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9564

bd466

(bd466) cytochrome_b_C
0.9503

bd1403

(bd1403) NA
0.9463

2465

hypothetical protein
0.9418

bd1304

(bd1304) Ycf4
0.939

3327

hypothetical protein
0.939

bd1863

(bd1863) NA
0.9372

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2-Hacid_dh_1 Putative D-isomer specific 2-hydroxyacid dehydrogenase; 2-Hydroxyacid dehydrogenases catalyze the... cl17240 334.105 6.51E-112 97 - 428 specific 240625
FDH_GDH_like superfamily Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related... - 334.105 6.51E-112 97 - 428 superfamily 266580
SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] - 246.456 1.00E-77 161 - 428 multi-dom 223189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48946 PHATRDRAFT_48946 Not available 147048 Not available Cre16.g689700.t1.1 Not available 488328

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006564 GO:0016616 -

GO:0006564

L-serine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
GO Category: 
BP

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

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