36301 HMG-box
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36301 chr_9 HMG-box 693775 694980 + HMG-box
NCBI ID Ensembl Genomes exon ID
7448077 Thaps36301.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0333
Normalized Mean Residue
Thaps_bicluster_0095
0.37
hypothetical protein
0.9129
(Tp_Myb4R1b) SANT
0.9075
hypothetical protein
0.8962
hypothetical protein
0.896
hypothetical protein
0.8895
hypothetical protein
0.8831
hypothetical protein
0.8786
hypothetical protein
0.8774
hypothetical protein
0.8717
hypothetical protein
0.8717
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and... cl00082 69.1847 7.13E-15 273 - 337 specific 238037
HMG-box superfamily High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and... - 69.1847 7.13E-15 273 - 337 superfamily 260179
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6025 PHATRDRAFT_6025 189563 115181 Not available Not available Not available 288743
KEGG description KEGG Pathway
Not available Not available
GO:0000785 GO:0003677 GO:0005634 GO:0006355 -

chromatin

Details: 
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
GO Category: 
CC

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP
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