36837 PTZ00265
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36837 chr_12 PTZ00265 207462 211957 - PTZ00265
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175
Normalized Mean Residue
Thaps_bicluster_0181
0.40
(bd1893) NA
0.9091
(bd1857) DnaJ
0.9001
(bd758) NA
0.8972
(bd687) NA
0.8943
(bd463) Aa_trans superfamily
0.8932
hypothetical protein
0.8924
(bd843) NA
0.8795
(bd1078) NA
0.8752
WD40 superfamily
0.8713
DUF2042 superfamily
0.8708
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 311.396 5.65E-97 1112 - 1351 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 311.396 5.65E-97 1112 - 1351 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 109.305 7.39E-26 91 - 355 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 109.305 7.39E-26 91 - 355 superfamily 250039
PTZ00265 multidrug resistance protein (mdr1); Provisional - 461.806 3.24E-138 86 - 1345 multi-dom 240339
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 155859 Not available 427008 Not available AT3G28415.1 521913
KEGG description KEGG Pathway
ABC transporters map02010
GO:0005524 GO:0006810 GO:0016021 GO:0042626 GO:0016887 GO:0000166 GO:0017111 GO:0004298 GO:0004299 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

ATPase activity, coupled to transmembrane movement of substances

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO Category: 
MF

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
Log in to post comments