36917 TGT superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36917 chr_12 TGT superfamily 805628 807470 - TGT superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0227
Normalized Mean Residue
Thaps_bicluster_0091
0.31
PseudoU_synth superfamily
0.8744
PLN02948
0.8674
hypothetical protein
0.8669
DRE_TIM_metallolyase superfamily
0.856
SIR2 superfamily
0.8534
hypothetical protein
0.853
hypothetical protein
0.8487
COG2319
0.8456
SrmB
0.8455
SpoU_methylase
0.8417
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TGT superfamily Queuine tRNA-ribosyltransferase; This is a family of queuine tRNA-ribosyltransferases EC:2.4.2.29,... - 492.8 1.24E-171 138 - 530 superfamily 267577
Tgt Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis] - 389.314 3.34E-131 140 - 530 multi-dom 223420
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24792 PHATRDRAFT_24792 Not available Not available 64581 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0006400 GO:0008479 GO:0008616 -

tRNA modification

Details: 
The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
GO Category: 
BP

queuine tRNA-ribosyltransferase activity

Details: 
Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine.
GO Category: 
MF

queuosine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.
GO Category: 
BP
Log in to post comments