37549 Ribosomal_S18
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
37549 chr_14 Ribosomal_S18 573875 575302 + Ribosomal_S18
NCBI ID Ensembl Genomes exon ID
7451253 Thaps37549.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0457
Aldolase_II superfamily
0.9115
0.9049
PLN02296
0.9033
(RT17) rpsQ
0.8907
OTU
0.887
P4Hc
0.8859
IGPD superfamily
0.8802
rplO
0.8791
hypothetical protein
0.8787
Sec1
0.8752
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_S18 Ribosomal protein S18; Ribosomal protein S18. cl00373 67.5051 3.18E-14 313 - 364 specific 250351
Ribosomal_S18 superfamily Ribosomal protein S18; Ribosomal protein S18. - 67.5051 3.18E-14 313 - 364 superfamily 260389
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11757 PHATR_10363 PHATR_10363 203932 162739 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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