37576 TPR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37576 chr_15 TPR 412140 413192 - TPR

Synonyms

NCBI ID Ensembl Genomes exon ID
7451895 Thaps37576.2, Thaps37576.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0430

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

17468

CK_II_beta
0.8246

15858

galactose_mutarotase_like
0.7959

10772

hypothetical protein
0.7954

19913

ybbN
0.7891

261357

NAD_binding_8 superfamily
0.7868

263554

SK
0.7754

13653

TCP1_eta
0.7609

264339

steroid binding protein 2
0.7575

bd838

(bd838) NA
0.7529

264481

Gly_transf_sug
0.752

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 69.3311 4.84E-15 54 - 143 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 69.3311 4.84E-15 54 - 143 superfamily 238112

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9462 PHATRDRAFT_9462 210613 219412 447541 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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