37617 TTL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37617 chr_15 TTL 500833 503625 + TTL

Synonyms

NCBI ID Ensembl Genomes exon ID
7442013 Thaps37617.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0451

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0010
 0.38

Most Highly Correlated Transcripts

bd1948

(bd1948) NA
0.8805

bd409

(bd409) Snf7 superfamily
0.8566

bd1667

(bd1667) Mpp10
0.8289

bd1875

(bd1875) NA
0.8273

bd1877

(bd1877) NA
0.8267

bd877

(bd877) NA
0.82

bd1709

(bd1709) NA
0.8009

bd933

(bd933) NA
0.7984

bd692

(bd692) NA
0.7768

bd1946

(bd1946) NA
0.7656

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TTL superfamily Tubulin-tyrosine ligase family; Tubulins and microtubules are subjected to several post-... - 224.89 1.38E-66 591 - 862 superfamily 251749
TTL superfamily Tubulin-tyrosine ligase family; Tubulins and microtubules are subjected to several post-... - 224.89 1.38E-66 591 - 862 superfamily 251749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 42298 Cre06.g300250.t1.1 AT1G77550.1 480588

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004835 GO:0006464 -

GO:0004835

tubulin-tyrosine ligase activity

Details: 
Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.
GO Category: 
MF

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

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