3784 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3784 chr_3 hypothetical protein 1793108 1794901 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7449561 Thaps3784.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0305

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0050
 0.45

Most Highly Correlated Transcripts

10989

hypothetical protein
0.8196

7676

hypothetical protein
0.7992

24668

hypothetical protein
0.7852

3228

hypothetical protein
0.7811

bd1803

(bd1803) NA
0.761

4062

hypothetical protein
0.7594

21882

MutL_C
0.7498

bd682

(bd682) NA
0.7471

7378

leucine-rich repeat protein
0.7466

264152

0.7391

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT1G65920.1 491910

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0008766 GO:0016881 GO:0018169 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0008766

UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.
GO Category: 
MF

GO:0016881

acid-amino acid ligase activity

Details: 
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

GO:0018169

ribosomal S6-glutamic acid ligase activity

Details: 
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
GO Category: 
MF

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