37944 UPF0061 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37944	chr_17	UPF0061 superfamily	453936	456849	-	UPF0061 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444234	Thaps37944.5, Thaps37944.4, Thaps37944.3, Thaps37944.2, Thaps37944.1, Thaps37944.6

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0064

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0006	0.41	0.00092 110

Most Highly Correlated Transcripts

264556 FBPase 0.8831	13448 Sec1 0.8684	261400 NA 0.8637	12899 AAA 0.8564	35728 FtsZ_type1 0.8551	35136 NA 0.8503
16114 PLN02350 0.8389	13393 PLN02321 0.8349	37118 FeThRed_B 0.8208	16295 FBPase 0.8183

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0061 superfamily		Uncharacterized ACR, YdiU/UPF0061 family; Uncharacterized ACR, YdiU/UPF0061 family.	-	327.12	4.86E-102	297 - 834	superfamily	267852

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_29423	PHATRDRAFT_29423	259986	262412	70317	Cre16.g648900.t1.1	AT5G13030.1	252691

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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