37976 cyclophilin_ABH_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37976	chr_17	cyclophilin_ABH_like	1010	2337	+	cyclophilin_ABH_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442162	Thaps37976.3, Thaps37976.6, Thaps37976.4, Thaps37976.1, Thaps37976.5, Thaps37976.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0210

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0238	0.33	11 380000

Most Highly Correlated Transcripts

bd1765 (bd1765) NA 0.9336	bd218 (bd218) Chloroa_b-bind superfamily 0.9187	bd672 (bd672) NA 0.913	bd1161 (bd1161) NA 0.9066	bd718 (bd718) PRK10387 0.9065	bd783 (bd783) Rieske superfamily 0.9047
25085 hypothetical protein 0.9033	bd1160 (bd1160) Chloroa_b-bind superfamily 0.8962	9467 hypothetical protein 0.8897	bd1645 (bd1645) tpt 0.8838

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin_ABH_like		cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans...	cl00197	319.588	4.31E-112	32 - 190	specific	238907
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	319.588	4.31E-112	32 - 190	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43152	PHATRDRAFT_43152	271442	297661	425773	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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