38180 RED_N superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38180 chr_18 RED_N superfamily 99148 100851 + RED_N superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450932 Thaps38180.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0170

Most Highly Correlated Transcripts

264072

(HSF43) HSF_DNA-bind superfamily
0.9353

19126

(Tp_CCCH12) YTH1
0.9161

22666

hypothetical protein
0.914

36273

Alpha_ANH_like_IV
0.9133

32704

PKc_like superfamily
0.9089

21274

hypothetical protein
0.9086

22899

hypothetical protein
0.9078

596

Adaptin_N
0.9073

3320

Abhydrolase_5
0.9053

36213

PKc_like superfamily
0.9021

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RED_N superfamily RED-like protein N-terminal region; This family contains sequences that are similar to the N-... - 89.5217 3.82E-20 92 - 250 superfamily 254444

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT2G26460.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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