38317 Complex1_LYR_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38317 chr_19b_31 Complex1_LYR_1 19217 19627 + Complex1_LYR_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7444375 Thaps38317.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0448

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8731

5778

hypothetical protein
0.8573

20799

LUC7
0.8451

21165

(Tp_TAF9) TAF9
0.8442

262559

(RAB11a) Rab11_like
0.8431

16114

PLN02350
0.8431

25272

Atg14
0.8414

21700

hypothetical protein
0.8412

36490

(APS2) APS2
0.84

22888

hypothetical protein
0.8393

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Complex1_LYR_1 Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR,... cl05087 69.9154 1.11E-16 59 - 114 specific 257590
Complex1_LYR_1 superfamily Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR,... - 69.9154 1.11E-16 59 - 114 superfamily 262428

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13700 PHATRDRAFT_13700 200515 196023 Not available Not available Not available 528838

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005743 GO:0006118 GO:0016651 -

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016651

oxidoreductase activity, acting on NAD(P)H

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO Category: 
MF

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