38475 HA2
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
38475 chr_20 HA2 94186 97974 + HA2
NCBI ID Ensembl Genomes exon ID
7448488 Thaps38475.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289
Normalized Mean Residue
Thaps_bicluster_0186
0.38
Peptidase_C19 superfamily
0.9069
SWIRM
0.9049
MogA_MoaB
0.9034
FusA
0.9022
(RPC2) PRK08565
0.902
hypothetical protein
0.893
COG1054
0.8913
PRK00142
0.8901
AAT_I superfamily
0.8891
hypothetical protein
0.8875
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 119.364 1.76E-30 632 - 770 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 119.364 1.76E-30 632 - 770 superfamily 266587
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 62.2552 4.17E-11 795 - 953 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 62.2552 4.17E-11 795 - 953 superfamily 238034
HA2 Helicase associated domain (HA2); This presumed domain is about 90 amino acid residues in length.... cl04503 127.333 6.06E-34 1007 - 1099 specific 252575
HA2 superfamily Helicase associated domain (HA2); This presumed domain is about 90 amino acid residues in length.... - 127.333 6.06E-34 1007 - 1099 superfamily 262181
OB_NTP_bind superfamily Oligonucleotide/oligosaccharide-binding (OB)-fold; This family is found towards the C-terminus of... - 123.562 2.00E-32 1133 - 1236 superfamily 254381
OB_NTP_bind superfamily Oligonucleotide/oligosaccharide-binding (OB)-fold; This family is found towards the C-terminus of... - 123.562 2.00E-32 1133 - 1236 superfamily 254381
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 110.274 8.37E-27 609 - 796 multi-dom 214692
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd755 Not available 210694 211264 Not available Not available AT4G16680.1 553525
KEGG description KEGG Pathway
Not available Not available
GO:0005524 GO:0008026 GO:0004386 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATP-dependent helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
GO Category: 
MF

helicase activity

Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
GO Category: 
MF
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