3874 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3874 chr_3 hypothetical protein 2010073 2011921 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452081 Thaps3874.2, Thaps3874.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0177
 0.33

Most Highly Correlated Transcripts

bd1820

(bd1820) Fasciclin
0.9254

bd1863

(bd1863) NA
0.9191

bd843

(bd843) NA
0.9161

bd218

(bd218) Chloroa_b-bind superfamily
0.915

bd794

(bd794) NA
0.9045

bd1306

(bd1306) NA
0.9014

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9006

bd1342

(bd1342) psaL
0.9005

bd529

(bd529) SNF2_N
0.9002

bd1403

(bd1403) NA
0.9

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

Add comment

Log in to post comments