38770 AAA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38770 chr_23 AAA 281130 282783 - AAA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442662 Thaps38770.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0329

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0070
 0.44

Most Highly Correlated Transcripts

bd692

(bd692) NA
0.9355

bd788

(bd788) NA
0.8995

bd1835

(bd1835) NA
0.8884

bd1946

(bd1946) NA
0.8785

36650

hypothetical protein
0.861

bd1875

(bd1875) NA
0.8523

bd815

(bd815) NA
0.8467

11540

hypothetical protein
0.8433

bd1237

(bd1237) 3a01204
0.8409

10989

hypothetical protein
0.8359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 92.2091 6.69E-22 262 - 432 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 92.2091 6.69E-22 262 - 432 superfamily 267297
AAA ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety... - 68.1689 1.60E-13 291 - 431 multi-dom 214640

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 315231 Cre10.g446400.t1.1 AT2G34560.1 474117

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 GO:0008568 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0008568

microtubule-severing ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.
GO Category: 
MF

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