3890 COG0398
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3890 chr_3 COG0398 2050687 2051892 + COG0398

Synonyms

NCBI ID Ensembl Genomes exon ID
7452087 Thaps3890.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0248

Most Highly Correlated Transcripts

16114

PLN02350
0.9329

13448

Sec1
0.9266

3180

hypothetical protein
0.9249

5101

UbiE
0.9223

37118

FeThRed_B
0.9208

1676

hypothetical protein
0.9173

34702

Sybindin superfamily
0.9163

19158

GRX_PICOT_like
0.916

40200

TRX_reduct
0.9158

24619

2-Hacid_dh_1
0.9145

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0398 Uncharacterized conserved protein [Function unknown] cl00429 93.9291 1.91E-22 135 - 286 specific 223475
SNARE_assoc superfamily SNARE associated Golgi protein; This is a family of SNARE associated Golgi proteins. The yeast... - 93.9291 1.91E-22 135 - 286 superfamily 260418

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43839 PHATR_43839 193637 118118 Not available Cre06.g262000.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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