38945 TRAPP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38945 chr_1 TRAPP superfamily 186154 187381 + TRAPP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445250 Thaps38945.3, Thaps38945.4, Thaps38945.2, Thaps38945.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0199

Most Highly Correlated Transcripts

261400

NA
0.9047

24560

PDI_a_family
0.9014

5695

Rhomboid superfamily
0.9007

882

hypothetical protein
0.8893

2409

MPN_NPL4
0.8887

13448

Sec1
0.8851

16295

FBPase
0.8843

3354

hypothetical protein
0.8841

9388

hypothetical protein
0.8817

11433

PKc
0.8807

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAPP superfamily Transport protein particle (TRAPP) component; TRAPP plays a key role in the targeting and/or fusion... - 168.833 1.06E-52 29 - 198 superfamily 261192

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_21198 PHATR_21198 260874 248732 94972 Cre03.g146467.t1.1 AT5G58030.1 303479

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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