38948 Peptidase_C97Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
38948	chr_1	Peptidase_C97	197021	198750	+	Peptidase_C97

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445112	Thaps38948.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0199

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0099	0.44	0.064 1.3

Most Highly Correlated Transcripts

9569 hypothetical protein 0.888	11377 hypothetical protein 0.8712	4027 hypothetical protein 0.8489	262744 hypothetical protein 0.8416	264043 (MYB15) MYB DNA binding protein/ transcription factor-like protein 0.8398	37810 GMPK 0.8387
36213 PKc_like superfamily 0.8354	263979 PKc_like superfamily 0.834	262721 (FHK1) sensory_box 0.8329	269747 COG5028 0.8306

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C97 superfamily		PPPDE putative peptidase domain; The PPPDE superfamily (after Permuted Papain fold Peptidases of...	-	120.935	2.34E-32	4 - 151	superfamily	253449
Peptidase_C97 superfamily		PPPDE putative peptidase domain; The PPPDE superfamily (after Permuted Papain fold Peptidases of...	-	120.935	2.34E-32	4 - 151	superfamily	253449

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1274		Not available	Not available	Not available	417423	Cre12.g555850.t1.1	AT3G07090.1	348745

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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