39032 sufAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
39032	chr_1	sufA	805742	806351	-	sufA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451563	Thaps39032.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0139

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0028	0.44

Most Highly Correlated Transcripts

36649 SufE superfamily 0.9093	9115 DnaJ 0.9029	37934 GRX_PICOT_like 0.8975	26991 GRX_GRXh_1_2_like 0.8958	2732 Cyclophilin_PPIL3_like 0.8934	35685 p23_NUDC_like 0.8925
3715 hypothetical protein 0.8923	270222 0.8916	32468 STKc_CDC2L1 0.884	41583 WD40 0.8835

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
sufA		Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover,...	cl00400	99.9522	1.66E-28	2 - 84	specific	223393
Fe-S_biosyn superfamily		Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster biosynthesis....	-	99.9522	1.66E-28	2 - 84	superfamily	260406

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14867	PHATRDRAFT_14867	221844	307989	61273	Not available	AT1G10500.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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