40233 (Tp_CSF3) CSP_CDS
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40233 chr_4 (Tp_CSF3) CSP_CDS 566940 567717 - CSP_CDS
NCBI ID Ensembl Genomes exon ID
7447471 Thaps40233.2, Thaps40233.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0291
Normalized Mean Residue
Thaps_bicluster_0279
0.39
Pho88 superfamily
0.881
DUF3523
0.8806
(bd1515) Adenylsuccinate_lyase_2
0.8805
PTZ00248
0.8786
PLN02908
0.867
hypothetical protein
0.8642
pdxS
0.863
PLN03233
0.8594
adk
0.8594
Aldolase_II superfamily
0.8591
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CSP_CDS Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes,... cl09927 91.101 9.12E-25 42 - 107 specific 239905
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 91.101 9.12E-25 42 - 107 superfamily 263921
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 213324 306266 78118 Cre06.g268600.t1.2 Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0006355 GO:0003676 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF
Log in to post comments