41300 (EXG1) Glyco_hydro_31
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41300 chr_7 (EXG1) Glyco_hydro_31 576760 579554 - Glyco_hydro_31

Synonyms

NCBI ID Ensembl Genomes exon ID
7452046 Thaps41300.2, Thaps41300.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0267

Most Highly Correlated Transcripts

21090

hypothetical protein
0.8931

11461

hypothetical protein
0.884

40200

TRX_reduct
0.8833

22723

hypothetical protein
0.8746

10487

hypothetical protein
0.8742

263203

Amidase superfamily
0.8676

9912

hypothetical protein
0.8663

23550

hypothetical protein
0.8655

23269

hypothetical protein
0.8646

8995

hypothetical protein
0.8613

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral... cl11402 648.479 0 280 - 620 specific 133134
GH31 superfamily The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea... - 648.479 0 280 - 620 superfamily 264353
Gal_mutarotas_2 superfamily Galactose mutarotase-like; This family is found N-terminal to glycosyl-hydrolase domains, and... - 65.9967 4.55E-13 156 - 233 superfamily 258085
Gal_mutarotas_2 superfamily Galactose mutarotase-like; This family is found N-terminal to glycosyl-hydrolase domains, and... - 65.9967 4.55E-13 156 - 233 superfamily 258085
Glyco_hydro_31 Glycosyl hydrolases family 31; Glycosyl hydrolases are key enzymes of carbohydrate metabolizm.... - 577.62 0 261 - 713 multi-dom 250327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50836 PHATRDRAFT_50836 180330 218514 419333 Cre03.g190500.t1.2 AT5G63840.1 350021

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0004553 GO:0005975 GO:0004182 GO:0006508 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0004182

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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