41778 (PURA) AdSS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41778 chr_9 (PURA) AdSS 1126071 1127758 + AdSS

Synonyms

NCBI ID Ensembl Genomes exon ID
7451009 Thaps41778.2, Thaps41778.3, Thaps41778.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

bd1221

(bd1221) recQ_fam
0.8989

bd258

(bd258) HU
0.8962

bd719

(bd719) NA
0.8838

9943

hypothetical protein
0.8828

37539

cpn10
0.8741

269759

hypothetical protein
0.8713

25708

hypothetical protein
0.8626

4604

hypothetical protein
0.8624

bd1465

(bd1465) PKc_like superfamily
0.8613

1888

hypothetical protein
0.856

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdSS Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP. IMP... cl17203 560.205 0 1 - 394 specific 239382
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 560.205 0 1 - 394 superfamily 266552

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39157 PHATRDRAFT_26256 PHATRDRAFT_26256 207280 303132 Not available Cre17.g734100.t1.2 AT3G57610.1 347173

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004019 GO:0005525 GO:0006164 -

GO:0004019

adenylosuccinate synthase activity

Details: 
Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H(+) + phosphate.
GO Category: 
MF

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0006164

purine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO Category: 
BP

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