4302 DUF788 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4302	chr_4	DUF788 superfamily	695362	696089	-	DUF788 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452630	Thaps4302.2, Thaps4302.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0185

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0064	0.41	0.00087 7.6

Most Highly Correlated Transcripts

263864 0.9787	33806 Mago_nashi 0.9381	1467 hypothetical protein 0.9303	33075 RimI 0.9297	34702 Sybindin superfamily 0.9249	11590 hypothetical protein 0.9226
6093 hypothetical protein 0.9193	269624 TIM_phosphate_binding superfamily 0.9131	17582 HAD-SF-IIA-hyp3 0.9128	261400 NA 0.9128

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF788 superfamily		Protein of unknown function (DUF788); This family consists of several eukaryotic proteins of...	-	74.3007	5.80E-17	43 - 202	superfamily	253282

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	307569	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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