4404 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4404 chr_4 hypothetical protein 937066 938602 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7453350 Thaps4404.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0132

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0038
 0.59

Most Highly Correlated Transcripts

41655

Chloroa_b-bind
0.8883

261400

NA
0.8804

4064

NADB_Rossmann superfamily
0.8759

13448

Sec1
0.8608

269624

TIM_phosphate_binding superfamily
0.8578

30701

PRK05279
0.8511

37118

FeThRed_B
0.8474

2023

HA
0.844

37934

GRX_PICOT_like
0.8417

268257

fabG
0.8344

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

Add comment

Log in to post comments