4921 DUF2779 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4921	chr_4	DUF2779 superfamily	2283796	2285899	-	DUF2779 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451409	Thaps4921.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0119	0.42	8.5 8.5

Most Highly Correlated Transcripts

3292 COG2319 0.8791	20737 Sun 0.8745	2157 D123 superfamily 0.8624	3650 hypothetical protein 0.8562	22045 (Tp_CCHH10) regulator [Rayko] 0.8507	5241 RNase_P_p30 superfamily 0.8491
5540 hypothetical protein 0.8483	14890 Cupin_8 superfamily 0.8478	21709 hypothetical protein 0.843	24332 hypothetical protein 0.843

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2779 superfamily		Domain of unknown function(DUF2779); This domain is conserved in bacteria. The function is not...	-	82.6382	1.79E-18	437 - 574	superfamily	256278

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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