5186 (PCK1) PEPCK_HprK superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5186 chr_5 (PCK1) PEPCK_HprK superfamily 566357 568410 + PEPCK_HprK superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449717 Thaps5186.2, Thaps5186.1, Thaps5186.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

bd1810

(bd1810) FAD_binding_4
0.7279

bd787

(bd787) NA
0.7223

20584

hypothetical protein
0.7137

3379

hypothetical protein
0.7123

36037

Trypsin_2
0.7028

bd878

(bd878) AAT_like
0.6872

bd1091

(bd1091) NA
0.6858

6572

hypothetical protein
0.6793

8085

hypothetical protein
0.6786

923

hypothetical protein
0.6773

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PEPCK_HprK superfamily Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first... - 914.569 0 71 - 618 superfamily 260315

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55018 PHATRDRAFT_55018 269498 283915 444355 Cre02.g141400.t1.2 AT4G37870.1 562373

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004612 GO:0005524 GO:0006094 GO:0004611 GO:0005525 -

GO:0004612

phosphoenolpyruvate carboxykinase (ATP) activity

Details: 
Catalysis of the reaction: ATP + oxaloacetate = ADP + CO(2) + H(+) + phosphoenolpyruvate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006094

gluconeogenesis

Details: 
The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
GO Category: 
BP

GO:0004611

phosphoenolpyruvate carboxykinase activity

Details: 
Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.
GO Category: 
MF

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

Add comment

Log in to post comments