5286 Cupin_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5286 chr_5 Cupin_8 superfamily 803263 805133 - Cupin_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449590 Thaps5286.2, Thaps5286.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.8527

bd1869

(bd1869) SET
0.8344

8414

NA
0.81

3071

NA
0.8096

5342

hypothetical protein
0.8089

6288

hypothetical protein
0.8063

4961

hypothetical protein
0.7965

34876

(COP1) Coatomer_WDAD
0.7936

16605

Aldolase_II superfamily
0.7935

1000

hypothetical protein
0.7845

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_8 superfamily Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. - 64.2935 6.85E-12 361 - 484 superfamily 267658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269297 Not available Not available Not available Not available Not available AT5G19840.1 466763

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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