5584 P4Hc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5584 chr_5 P4Hc 1570332 1571998 + P4Hc

Synonyms

NCBI ID Ensembl Genomes exon ID
7445175 Thaps5584.2, Thaps5584.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0116
 0.38

Most Highly Correlated Transcripts

270222

0.9376

5659

hypothetical protein
0.9336

9907

hypothetical protein
0.9237

1000

hypothetical protein
0.9234

7696

2_5_RNA_ligase2
0.9206

3837

UshA
0.9185

262671

hypothetical protein
0.9144

5832

Cyt_b561_CYB561D2_like
0.9138

6757

hypothetical protein
0.9137

1850

PKc_like superfamily
0.9083

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P4Hc Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen... cl17304 107.859 1.44E-27 278 - 473 specific 214780
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 107.859 1.44E-27 278 - 473 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13557 PHATRDRAFT_13557 Not available Not available 435815 Cre03.g160200.t1.2 AT4G33910.1 310730

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0016706 GO:0019538 GO:0000907 GO:0018602 GO:0019798 GO:0045432 GO:0045442 -

GO:0016706

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

GO:0000907

sulfonate dioxygenase activity

Details: 
Catalysis of the reaction: sulfonate + 2-oxoglutarate + O2 = sulfite + aminoacetaldehyde + succinate + CO2.
GO Category: 
MF

GO:0018602

2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity

Details: 
Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.
GO Category: 
MF

GO:0019798

procollagen-proline dioxygenase activity

Details: 
Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-hydroxy-L-proline + succinate + CO2.
GO Category: 
MF

GO:0045432

NA

Details: 
NA
GO Category: 
NA

GO:0045442

deacetoxycephalosporin-C hydroxylase activity

Details: 
Catalysis of the reaction: 2-oxoglutarate + deacetoxycephalosporin C + O(2) = CO(2) + deacetylcephalosporin C + succinate.
GO Category: 
MF

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