5656 DUF1823 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5656	chr_5	DUF1823 superfamily	1746078	1747062	+	DUF1823 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445213	Thaps5656.2, Thaps5656.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0043

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0132	0.41	2.4 2.2

Most Highly Correlated Transcripts

33161 prfA 0.8744	268443 SAICAR_synt_Sc 0.8726	40001 PRK05433 0.8587	21939 Aldo_ket_red 0.8568	30939 S1_IF1 0.8552	4524 DHQS 0.8547
264556 FBPase 0.8542	4424 LabA_like 0.8497	22163 hypothetical protein 0.8497	2611 hypothetical protein 0.8448

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1823 superfamily		Domain of unknown function (DUF1823); This presumed domain is functionally uncharacterized.	-	112.017	1.40E-30	104 - 231	superfamily	192168

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49182	PHATRDRAFT_49182	161965	299373	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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