6114 Guanylate_cyc_2 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6114	chr_6	Guanylate_cyc_2 superfamily	734366	735164	-	Guanylate_cyc_2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443597	Thaps6114.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0139

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0044	0.46

Most Highly Correlated Transcripts

bd1813 (bd1813) NA 0.9643	bd738 (bd738) NA 0.9335	bd1801 (bd1801) NA 0.9329	bd690 (bd690) NA 0.8999	bd1934 (bd1934) NA 0.8866	2303 hypothetical protein 0.8803
7696 2_5_RNA_ligase2 0.8676	3204 hypothetical protein 0.8666	25535 hypothetical protein 0.8616	6534 DER1 0.8615

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Guanylate_cyc_2 superfamily		Guanylylate cyclase; Members of this family of proteins catalyse the conversion of guanosine...	-	77.0361	2.86E-17	44 - 261	superfamily	255547

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_bd1162	PHATRDRAFT_bd1162	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments