6363 (RL23a) PTZ00191
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6363 chr_6 (RL23a) PTZ00191 1393971 1394876 - PTZ00191
NCBI ID Ensembl Genomes exon ID
7442729 Thaps6363.1, Thaps6363.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046
Normalized Mean Residue
Thaps_bicluster_0205
0.26
PTZ00106
0.9317
(RL26) KOW_RPL26
0.9266
(RS15A) PTZ00158
0.9255
(RS23) Ribosomal_S23
0.923
(Rpl27) KOW_RPL27
0.9192
(RL11A) PTZ00156
0.9098
(RS26) PLN00186
0.9093
(RL36) Ribosomal_L36e
0.9084
hypothetical protein
0.906
(RL44) PTZ00157
0.8993
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK14548 50S ribosomal protein L23P; Provisional cl00326 119.577 3.54E-35 86 - 168 specific 237750
Ribosomal_L23 superfamily Ribosomal protein L23; Ribosomal protein L23. - 119.577 3.54E-35 86 - 168 superfamily 241787
PTZ00191 60S ribosomal protein L23a; Provisional - 174.118 1.20E-55 50 - 168 multi-dom 185507
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 250843 307990 59431 Cre06.g282500.t1.2 AT3G55280.2 353704
KEGG description KEGG Pathway
Ribosome map03010
GO:0003723 GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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