6517 TLD superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6517	chr_6	TLD superfamily	1782378	1783586	+	TLD superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444599	Thaps6517.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0321

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0209	0.34	0.96 2100

Most Highly Correlated Transcripts

2010 hypothetical protein 0.8724	5119 MATE_like superfamily 0.8328	9471 SEC-C superfamily 0.8086	10096 hypothetical protein 0.787	10800 hypothetical protein 0.7845	11101 TauE 0.7763
36679 PEMT 0.7666	4095 hypothetical protein 0.7661	8439 NADB_Rossmann superfamily 0.7542	bd760 (bd760) ZnMc superfamily 0.7537

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TLD superfamily		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	-	106.252	2.39E-27	226 - 380	superfamily	261195

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	268643	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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