6533 PIG-U
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6533 chr_6 PIG-U 1816612 1818992 + PIG-U
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0275
hypothetical protein
0.9653
EEP superfamily
0.8962
COG3899
0.8903
AarF
0.8737
hypothetical protein
0.8656
COG3899
0.8656
NAD_binding_8 superfamily
0.8592
Glycos_transf_1 superfamily
0.8571
NADB_Rossmann superfamily
0.8519
COG3899
0.8506
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIG-U superfamily GPI transamidase subunit PIG-U; Many eukaryotic proteins are anchored to the cell surface via... - 175.54 7.27E-49 283 - 579 superfamily 253881
PIG-U superfamily GPI transamidase subunit PIG-U; Many eukaryotic proteins are anchored to the cell surface via... - 175.54 7.27E-49 283 - 579 superfamily 253881
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13741 PHATRDRAFT_13741 272836 162030 Not available Not available Not available 314121
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0003824 GO:0005789 GO:0006506 GO:0016021 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

endoplasmic reticulum membrane

Details: 
The lipid bilayer surrounding the endoplasmic reticulum.
GO Category: 
CC

GPI anchor biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC
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