24063 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24063 chr_9 COG3899 996961 1001905 + COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7450987 Thaps24063.1, Thaps24063.3, Thaps24063.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0151

Most Highly Correlated Transcripts

263610

COG3899
0.9458

263599

COG3899
0.9402

8979

hypothetical protein
0.9385

25356

DUF1325 superfamily
0.938

22333

hypothetical protein
0.9364

5660

hypothetical protein
0.9318

25600

hypothetical protein
0.9285

1216

hypothetical protein
0.925

23207

hypothetical protein
0.9245

6378

hypothetical protein
0.9234

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 66.7173 2.04E-12 548 - 756 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 66.7173 2.04E-12 548 - 756 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 234.6 9.88E-64 549 - 1337 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000155 GO:0004673 GO:0016775 GO:0018110 -

GO:0000155

phosphorelay sensor kinase activity

Details: 
Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO Category: 
MF

GO:0004673

protein histidine kinase activity

Details: 
Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine.
GO Category: 
MF

GO:0016775

phosphotransferase activity, nitrogenous group as acceptor

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).
GO Category: 
MF

GO:0018110

histone arginine kinase activity

Details: 
Catalysis of the reaction: histone L-arginine + ATP = histone N(omega)-phospho-L-arginine + ADP + 2 H(+).
GO Category: 
MF

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