8551 DDHD superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8551	chr_10	DDHD superfamily	892202	894544	+	DDHD superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450758	Thaps8551.1, Thaps8551.3, Thaps8551.2, Thaps8551.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0198

Most Highly Correlated Transcripts

12836 EEP superfamily 0.9157	6286 hypothetical protein 0.9018	24686 hypothetical protein 0.9012	1216 hypothetical protein 0.8948	10635 COG3217 0.8918	9650 hypothetical protein 0.8905
24183 hypothetical protein 0.8847	6207 hypothetical protein 0.8841	25619 hypothetical protein 0.8835	21791 hypothetical protein 0.8819

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DDHD superfamily		DDHD domain; The DDHD domain is 180 residues long and contains four conserved residues that may...	-	121.323	4.91E-31	467 - 687	superfamily	251574

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44066	PHATR_44066	229343	286085	Not available	Not available	AT1G31480.1	562784

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0046872 GO:0004620 GO:0016298 GO:0016789 GO:0018731 GO:0018732 GO:0018733 GO:0018734 -

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