8779 Ras_like_GTPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8779 chr_11a Ras_like_GTPase superfamily 511537 512305 - Ras_like_GTPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443315 Thaps8779.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0346

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0145
 0.29

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9113

263917

0.8532

264882

0.7132

264777

hypothetical protein
0.6951

10754

hypothetical protein
0.6923

263838

hypothetical protein
0.6671

38322

Sar1
0.6467

263864

0.6339

9724

(sig3) sig3-like protein
0.6272

263123

RGS
0.6222

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 242.843 6.44E-81 36 - 206 superfamily 266525

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre17.g722350.t1.2 Not available 351128

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 GO:0007264 GO:0006886 GO:0015031 GO:0003924 GO:0003925 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0007264

small GTPase mediated signal transduction

Details: 
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO Category: 
BP

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0003925

NA

Details: 
NA
GO Category: 
NA

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