9512 PTZ00168
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9512 chr_13 PTZ00168 614221 615475 - PTZ00168

Synonyms

NCBI ID Ensembl Genomes exon ID
7447837 Thaps9512.3, Thaps9512.2, Thaps9512.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0094
 0.37

Most Highly Correlated Transcripts

262977

NA
0.9507

6028

NA
0.9472

bd1160

(bd1160) Chloroa_b-bind superfamily
0.937

bd1820

(bd1820) Fasciclin
0.9364

bd1765

(bd1765) NA
0.9318

bd208

(bd208) DUF3529
0.9294

bd1306

(bd1306) NA
0.9281

bd1652

(bd1652) ABC_ATPase superfamily
0.9253

bd1645

(bd1645) tpt
0.9238

bd1380

(bd1380) ycf39
0.9231

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.5115 7.06E-16 230 - 305 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.5115 7.06E-16 230 - 305 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.5115 7.06E-16 230 - 305 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.5115 7.06E-16 230 - 305 superfamily 249634
PTZ00168 mitochondrial carrier protein; Provisional - 79.1978 1.80E-17 59 - 299 multi-dom 185494

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15639 PHATRDRAFT_15639 152626 282072 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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