9568 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9568 chr_13 COG3899 794351 798698 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7450499 Thaps9568.1, Thaps9568.2, Thaps9568.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0031
 0.36

Most Highly Correlated Transcripts

bd1777

(bd1777) NA
0.8947

270222

0.8698

bd1949

(bd1949) NA
0.8683

261357

NAD_binding_8 superfamily
0.8567

bd392

(bd392) DEXDc
0.852

bd1620

(bd1620) ThiG
0.84

bd841

(bd841) Abhydrolase_6
0.8302

25653

hypothetical protein
0.8244

23031

hypothetical protein
0.8154

24063

COG3899
0.8115

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 81.7401 1.99E-17 354 - 557 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 81.7401 1.99E-17 354 - 557 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 243.845 6.10E-67 353 - 1253 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

Add comment

Log in to post comments