9695 Cupin_8 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9695	chr_14	Cupin_8 superfamily	126544	127969	-	Cupin_8 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450824	Thaps9695.3, Thaps9695.1, Thaps9695.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0165

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0047	0.45

Most Highly Correlated Transcripts

8324 hypothetical protein 0.8681	29818 Uup 0.8615	264610 Prolidase 0.8555	1856 hypothetical protein 0.8514	23602 hypothetical protein 0.8473	1588 hypothetical protein 0.8464
950 hypothetical protein 0.845	268232 COG3899 0.8426	21994 hypothetical protein 0.8399	15417 AAA 0.8364

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cupin_8 superfamily		Cupin-like domain; This cupin like domain shares similarity to the JmjC domain.	-	97.4206	9.31E-24	151 - 276	superfamily	267658

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_35781	PHATRDRAFT_35781	246102	284520	435100	Cre03.g175750.t1.2	AT3G45880.1	500996

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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