9849 SQR_TypeC_SdhC
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
9849 chr_14 SQR_TypeC_SdhC 530757 531768 - SQR_TypeC_SdhC
NCBI ID Ensembl Genomes exon ID
7452686 Thaps9849.1, Thaps9849.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0432
Normalized Mean Residue
Thaps_bicluster_0271
0.35
vATP-synt_E
0.8985
0.8983
FeThRed_B
0.8845
hypothetical protein
0.8816
Rab6
0.8803
hypothetical protein
0.8782
Bromodomain superfamily
0.8755
ATP-synt_F superfamily
0.8751
(SDH1) sdhB
0.8702
hypothetical protein
0.8691
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SQR_TypeC_SdhC Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit;... cl00881 90.6718 1.11E-22 179 - 301 specific 239579
SQR_QFR_TM superfamily Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane... - 90.6718 1.11E-22 179 - 301 superfamily 260677
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10356 PHATRDRAFT_10356 271472 209467 432409 Cre01.g020350.t1.2 Not available 285862
KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110
GO:0000104 GO:0006099 GO:0006118 GO:0016020 GO:0008177 -

succinate dehydrogenase activity

Details: 
Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.
GO Category: 
MF

tricarboxylic acid cycle

Details: 
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

succinate dehydrogenase (ubiquinone) activity

Details: 
Catalysis of the reaction: succinate + ubiquinone = fumarate + ubiquinol.
GO Category: 
MF
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