ThpsCp070 (ycf39) Ycf39Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCp070	chloroplast	(ycf39) Ycf39	62662	63621	+	Ycf39

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524869	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0069

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0094	0.37	39 0.05

Most Highly Correlated Transcripts

ThpsCp070 (ycf39) Ycf39 1	bd1403 (bd1403) NA 0.9763	bd208 (bd208) DUF3529 0.9689	bd1306 (bd1306) NA 0.9659	bd1387 (bd1387) psbE 0.9428	bd1304 (bd1304) Ycf4 0.9424
bd1645 (bd1645) tpt 0.9386	bd1342 (bd1342) psaL 0.9381	bd1820 (bd1820) Fasciclin 0.9317	bd1037 (bd1037) Ycf66_N 0.9225

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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