bd1133 (bd1133) ATM1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1133 bd_6x46 (bd1133) ATM1 62710 64757 - ATM1

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Most Highly Correlated Transcripts

bd1133

(bd1133) ATM1
1

269403

hypothetical protein
0.9021

22302

Peptidase_C19 superfamily
0.8999

5295

hypothetical protein
0.8993

21533

hypothetical protein
0.8907

5007

hypothetical protein
0.8894

24262

(RS2) rpsE_arch
0.8695

21027

hypothetical protein
0.8693

24414

(MAP2) PTZ00053
0.8689

18190

P4Hc
0.864

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 378.497 1.03E-127 359 - 603 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 79.6444 9.11E-17 74 - 311 superfamily 250039
ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [... - 610.513 0 97 - 603 multi-dom 227590

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT4G28620.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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