bd1258 (bd1258) fer2Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1258	bd_26x41	(bd1258) fer2	59756	60055	+	fer2

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0062

Most Highly Correlated Transcripts

ThpsCp003 (petF) ferredoxin 1	ThpsCp082 (rpl34) ribosomal protein L34 0.9423	ThpsCp134 (rpl34) ribosomal protein L34 0.9423	bd1435 (bd1435) ycf3 0.9002	ThpsCp038 (ycf3) photosystem I assembly protein Ycf3 0.9002	ThpsCp096 (rpl4) ribosomal protein L4 0.8906
ThpsCp099 (rps19) ribosomal protein S19 0.8844	bd93 (bd93) NA 0.8823	ThpsCp104 (rpl29) 50S ribosomal protein L29 0.8706	ThpsCp113 (secY) preprotein translocase subunit SecY 0.8682

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
fer2		2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron...	cl00159	95.9248	5.37E-27	13 - 90	specific	238126
fer2 superfamily		2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron...	-	95.9248	5.37E-27	13 - 90	superfamily	260226

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	430761	Cre14.g626700.t1.2	AT1G60950.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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